{
  "_id": "6a103fdeacfb0bcc41c9cf6c",
  "Package": "IPDMR",
  "Title": "Support Code for the Introduction to Practical Disease Modelling\nCourse",
  "Version": "0.5.2-1",
  "Date": "2025-02-07",
  "Description": "A collection of functions and classes that are used to\nillustrate fundamental concepts of disease modelling as part of\na physical course series taught jointly by the University of\nCopenhagen and University of Sydney. The package is not\nintended to be used for other purposes; you are welcome to do\nso, but please note that the package may change without notice\nin order to suit changes to the associated taught course. All\nfunctions, arguments and classes are therefore subject to\nchange without following any form of deprecation process.",
  "Authors@R": "c(\nperson(given=\"Matt\", family=\"Denwood\", email=\"md@sund.ku.dk\", role=c(\"aut\", \"cre\")),\nperson(given=\"Carsten\", family=\"Kirkeby\", email=\"ckir@sund.ku.dk\", role=c(\"rev\")),\nperson(given=\"Michael\", family=\"Ward\", email=\"michael.ward@sydney.edu.au\", role=c(\"rev\"))\n)",
  "License": "GPL (>= 3)",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.2",
  "Config/testthat/edition": "3",
  "VignetteBuilder": "knitr",
  "Language": "en-GB",
  "Config/pak/sysreqs": "libicu-dev",
  "Repository": "https://ku-awdc.r-universe.dev",
  "Date/Publication": "2025-02-07 16:40:00 UTC",
  "RemoteUrl": "https://github.com/ku-awdc/IPDMR",
  "RemoteRef": "v0.5.2",
  "RemoteSha": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-05-11 08:35:50 UTC",
    "User": "root"
  },
  "Author": "Matt Denwood [aut, cre],\nCarsten Kirkeby [rev],\nMichael Ward [rev]",
  "Maintainer": "Matt Denwood <md@sund.ku.dk>",
  "MD5sum": "574817fb8ea6f1a458cb2e5bfe2cac24",
  "_user": "ku-awdc",
  "_type": "src",
  "_file": "IPDMR_0.5.2-1.tar.gz",
  "_fileid": "c03bf66deccd48d1d3f1289767ef770a90aee9da2c97417e74f4c8c4436749d8",
  "_filesize": 158194,
  "_sha256": "c03bf66deccd48d1d3f1289767ef770a90aee9da2c97417e74f4c8c4436749d8",
  "_created": "2026-05-11T08:35:50.000Z",
  "_published": "2026-05-22T11:37:02.648Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77371686348,
      "time": 268,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "6913967757"
    },
    {
      "job": 77371686363,
      "time": 256,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "6913963999"
    },
    {
      "job": 77371686403,
      "time": 275,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6913969996"
    },
    {
      "job": 77371686418,
      "time": 296,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6913975842"
    },
    {
      "job": 77371686291,
      "time": 217,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "6913951568"
    },
    {
      "job": 77371686227,
      "time": 411,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "6914012957"
    },
    {
      "job": 77371686324,
      "time": 254,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6913962937"
    },
    {
      "job": 77371686364,
      "time": 358,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6913995205"
    },
    {
      "job": 77371685640,
      "time": 265,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6913883061"
    },
    {
      "job": 77371685529,
      "time": 146,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7159549543"
    },
    {
      "job": 77371686394,
      "time": 313,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "6913981473"
    },
    {
      "job": 77371686350,
      "time": 332,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "6913987463"
    },
    {
      "job": 77371686479,
      "time": 345,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "6913991194"
    }
  ],
  "_buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/ku-awdc/IPDMR",
  "_commit": {
    "id": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
    "author": "Matt Denwood <md@sund.ku.dk>",
    "committer": "Matt Denwood <md@sund.ku.dk>",
    "message": "Fix bug in suggest_boxes\n",
    "time": 1738946400
  },
  "_maintainer": {
    "name": "Matt Denwood",
    "email": "md@sund.ku.dk",
    "login": "mdenwood",
    "uuid": 22961052
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.3.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "deSolve",
      "role": "Imports"
    },
    {
      "package": "checkmate",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "R6",
      "role": "Imports"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "pbapply",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "spelling",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "ku-awdc",
  "_selfowned": true,
  "_usedby": 1,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "mdenwood",
      "count": 40,
      "uuid": 22961052
    }
  ],
  "_userbio": {
    "uuid": 46750455,
    "type": "organization",
    "name": "ku-awdc"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/IPDMR"
  },
  "_devurl": "https://github.com/ku-awdc/ipdmr",
  "_searchresults": 0,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/IPDMR.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "ab_continuous",
    "ab_discrete",
    "apply_rates",
    "BetweenGroupClass",
    "make_group",
    "multi_seir_det",
    "multi_seir_stoc",
    "seir_det",
    "seir_stoc",
    "SEIRclass",
    "si_continuous",
    "si_discrete",
    "sir_det",
    "sir_stoc",
    "suggest_boxes"
  ],
  "_help": [
    {
      "page": "ab_continuous",
      "title": "A super-simple continuous-time two-compartment model",
      "topics": [
        "ab_continuous"
      ]
    },
    {
      "page": "ab_discrete",
      "title": "A super-simple discrete-time two-compartment model",
      "topics": [
        "ab_discrete"
      ]
    },
    {
      "page": "apply_rates",
      "title": "Combine compartment sizes and rates to obtain compartment change values",
      "topics": [
        "apply_rates"
      ]
    },
    {
      "page": "autoplot.ipdmr_ct",
      "title": "Autoplot methods associated with IPDMR model functions",
      "topics": [
        "autoplot.ipdmr_ct"
      ]
    },
    {
      "page": "BetweenGroupClass",
      "title": "Encapsulated OO class for between-group spread models",
      "topics": [
        "BetweenGroupClass"
      ]
    },
    {
      "page": "group_models",
      "title": "Discrete-time deterministic and stochastic SIR and SEIR models",
      "topics": [
        "group_models",
        "seir_det",
        "seir_stoc",
        "sir_det",
        "sir_stoc"
      ]
    },
    {
      "page": "make_group",
      "title": "Generate an object representing a within-group spread model",
      "topics": [
        "make_group"
      ]
    },
    {
      "page": "multi_models",
      "title": "Discrete-time deterministic and stochastic SEIR models for multiple groups",
      "topics": [
        "multi_models",
        "multi_seir_det",
        "multi_seir_stoc"
      ]
    },
    {
      "page": "SEIRclass",
      "title": "Encapsulated OO classes for within-group SEIR models",
      "topics": [
        "SEIRclass"
      ]
    },
    {
      "page": "si_continuous",
      "title": "A simple continuous-time SI model",
      "topics": [
        "si_continuous"
      ]
    },
    {
      "page": "si_discrete",
      "title": "A simple discrete-time SI model",
      "topics": [
        "si_discrete"
      ]
    },
    {
      "page": "suggest_boxes",
      "title": "Suggest a number of sub-compartments to obtain a suitable distribution of transition times",
      "topics": [
        "suggest_boxes"
      ]
    }
  ],
  "_readme": "https://github.com/ku-awdc/IPDMR/raw/v0.5.2/README.md",
  "_rundeps": [
    "backports",
    "checkmate",
    "cli",
    "cpp11",
    "deSolve",
    "dplyr",
    "farver",
    "generics",
    "ggplot2",
    "glue",
    "gtable",
    "isoband",
    "labeling",
    "lifecycle",
    "magrittr",
    "pbapply",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "rlang",
    "S7",
    "scales",
    "stringi",
    "stringr",
    "tibble",
    "tidyr",
    "tidyselect",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_score": 2.1760912590556813,
  "_indexed": true,
  "_nocasepkg": "ipdmr",
  "_universes": [
    "ku-awdc",
    "mdenwood"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.5.2-1",
      "date": "2026-05-11T08:39:12.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
      "fileid": "262c8a52238071ad96e68e2f75722f342b6ab875d04adfaf7e2e96f8c235cbe9",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.5.2-1",
      "date": "2026-05-11T08:39:05.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
      "fileid": "9bf939363c76691d03c9b41a7100714c0d5d0c59a3be66973a3fd50005a1a036",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.5.2-1",
      "date": "2026-05-11T08:39:18.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
      "fileid": "ad1659d4afe4e86ad02a4b368a040f078154409a15a1344d8082df79c23b7135",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.5.2-1",
      "date": "2026-05-11T08:39:21.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
      "fileid": "739114e64c8b50a0ef109035b11a65628eed9e0b85fcd50733e36606408efea1",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.5.2-1",
      "date": "2026-05-11T08:38:36.000Z",
      "arch": "aarch64",
      "commit": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
      "fileid": "bd810624e9d206a6686f2ad13a79f67d316fa888c8d95254ea13b5b440bfa1d4",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.5.2-1",
      "date": "2026-05-11T08:39:40.000Z",
      "arch": "x86_64",
      "commit": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
      "fileid": "67b2e34e2d5a1904e8f8af9cd3f3fbf5264997a98e5f03d4cf2462194b49bbe7",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.5.2-1",
      "date": "2026-05-11T08:39:02.000Z",
      "arch": "aarch64",
      "commit": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
      "fileid": "db246a45d6a379a30cba79a031cee3fcc3127ba58f802abf0a1c014ff51e15b2",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.5.2-1",
      "date": "2026-05-11T08:39:26.000Z",
      "arch": "x86_64",
      "commit": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
      "fileid": "56b9f64680c63aa0cb3cc0f1a2be42415703755c648e3d31d26c942f8d9ae27c",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.5.2-1",
      "date": "2026-05-11T08:38:19.000Z",
      "arch": "x86_64",
      "commit": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
      "fileid": "f59a583d752432d6f2510f41d9037d773ba7d7cb4b11428e5ad1318f8ec27bbe",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.5.2-1",
      "date": "2026-05-11T08:38:30.000Z",
      "arch": "x86_64",
      "commit": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
      "fileid": "62c8abf9e9ff910a6311763525d1f985bc8bc075656e5d05b5fd75f071477f8b",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.5.2-1",
      "date": "2026-05-11T08:38:35.000Z",
      "arch": "x86_64",
      "commit": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
      "fileid": "bd9ce34d4a657368f6dc662b1a56c341ef819b708e8ce01bb50ca70637610164",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.5.2-1",
      "date": "2026-05-22T11:36:16.000Z",
      "arch": "emscripten",
      "commit": "1f0b57d0413a2cee28a7a6a05c1ab502d76ee1d4",
      "fileid": "95f47a0c10e59f2c7a6871fae4a98d971ca929df97186c2057b0cf7432204277",
      "status": "success",
      "buildurl": "https://github.com/r-universe/ku-awdc/actions/runs/25659237373"
    }
  ]
}